Description
healthpopR functions uses follow up datasets, which have
fixed variable names. This document describes variables and names. Here
you can get idea of the shape of the datasets needed.
population
Population data should include only one row per ID and few DATE variables.
| Variable Name | Description |
|---|---|
| ID | Patient identifier |
| DATE_BIRTH | Date of patient birth |
| DATE_DEATH | Date of when patient died or NA |
| DATE_MIGRATION | Date of when patient migrated to abroad or NA |
diagnoses
Diagnoses data is follow-up of the patients diagnoses over the timeline.
| Variable Name | Description |
|---|---|
| ID | Patient identifier |
| DGREG | Diagnose Code Source (ICD10, ICD9 or ICD8) |
| SRC | Registry source (ex. hilmo, avohilmo etc.) |
| DATE | Date of the diagnose |
| DG | Full Diagnose Code (ex. E11, H903, H0410) |
| ICD10_3LETTERS | Only with ICD10 code. Diagnose Code in first 3 letters |
| ICD10_CLASS | Only with ICD10 code. ICD-10 Diagnose Class (Ex. E00–E90, H60–H95, H00–H59) |
| DATE_BIRTH | Day of patient birth |
| AGE | Only with murtumat Patient age on diagnose date |
other datasets
These will be modified in future. Now these are used only in cox modelling phases